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Class iubio.readseq.XmlSeqFormat
java.lang.Object
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+----iubio.readseq.BioseqFormat
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+----iubio.readseq.XmlSeqFormat
- public class XmlSeqFormat
- extends iubio.readseq.BioseqFormat
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saxParserClass
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tag1
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XmlSeqFormat()
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canread()
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canwrite()
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contentType()
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formatName()
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formatSuffix()
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formatTestLine(OpenString, int, int)
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hasdoc()
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locateXmlParser()
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newReader()
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newWriter()
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tag1
public static java.lang.String tag1
saxParserClass
public static java.lang.String saxParserClass
XmlSeqFormat
public XmlSeqFormat()
formatName
public java.lang.String formatName()
- Overrides:
- formatName in class iubio.readseq.BioseqFormat
formatSuffix
public java.lang.String formatSuffix()
- Overrides:
- formatSuffix in class iubio.readseq.BioseqFormat
contentType
public java.lang.String contentType()
- Overrides:
- contentType in class iubio.readseq.BioseqFormat
canread
public boolean canread()
- Overrides:
- canread in class iubio.readseq.BioseqFormat
canwrite
public boolean canwrite()
- Overrides:
- canwrite in class iubio.readseq.BioseqFormat
hasdoc
public boolean hasdoc()
- Overrides:
- hasdoc in class iubio.readseq.BioseqFormat
newReader
public iubio.readseq.BioseqReaderIface newReader()
- Overrides:
- newReader in class iubio.readseq.BioseqFormat
newWriter
public iubio.readseq.BioseqWriterIface newWriter()
- Overrides:
- newWriter in class iubio.readseq.BioseqFormat
locateXmlParser
public static void locateXmlParser()
formatTestLine
public boolean formatTestLine(flybase.OpenString line,
int atline,
int skiplines)
- Overrides:
- formatTestLine in class iubio.readseq.BioseqFormat
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