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Class iubio.readseq.Testseq

java.lang.Object
   |
   +----iubio.readseq.Testseq

public class Testseq
extends java.lang.Object
Test biosequence input stream for known formats

See Also:
iubio.readseq.Readseq

Variable Index

 o kBufferSize
 o maxlines2check

Constructor Index

 o Testseq()

Method Index

 o getFilterReader()
 o getFormat()
 o getPossibleNewInputReader()
 o getStartLine()
 o testFormat(Reader, SeqFileInfo)

Variables

 o maxlines2check
 public static int maxlines2check
 o kBufferSize
 public static int kBufferSize

Constructors

 o Testseq
 public Testseq()

Methods

 o getFormat
 public int getFormat()
 o getStartLine
 public int getStartLine()
 o getPossibleNewInputReader
 public java.io.Reader getPossibleNewInputReader()
 o getFilterReader
 public java.io.Reader getFilterReader()
 o testFormat
 public int testFormat(java.io.Reader ins,
                       iubio.readseq.SeqFileInfo si)

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